Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMHRGKGMKFVGDSRIPAEKKPNIPKDYSEYPGKTEAFWPNFLLKEWMVGAVFLIGFLV---LTIVHQPPLERMADPTDTGYIPLPDWYFLFLYQLLKYEYAAGSFTVVGAMIMPGLAFGALLLAPFLDRGTE-RRPWKRPVAVGMMLLAISAAVFLTWQSVATHDWAKAEEQGKITKEADIDTNAEGYKVFKEQGCISCHGDNLQGGAAGPSLVDSGLKPDEIKKIAVEGKGKMPAGVFKGNDKQLEELAKFISETTAK
1Q90 Chain:D ((29-143))----------------------------------EPAWPNDLL--YMFPVVILGTFACVIGLSVLDPAAMGEPANPFATPLEILPEWYFYPVFQILR----VVPNKLLGVLLMAAVPAG-LITVPFIESINKFQNPYRRPIATILFLLGTLVAVWL-------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1Q90.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 120 -22083 -184.02 -198.94
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain D : 0.69

3D Compatibility (PKB) : -184.02
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.69
QMean score : 0.166

(partial model without unconserved sides chains):
PDB file : Tito_1Q90.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1Q90-query.scw
PDB file : Tito_Scwrl_1Q90.pdb: