Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMMDFLSKTPEPPYYAVIFSSVKS-ENDTGYGETAERMVSLAADQPGFLGVESVREAD----GRGITVSYWDSMDAINHWRHHTEHQAAKEKGRS------VWYESYAVRVAKVDRQRLFQENTND
2ZDO Chain:A ((3-108))-----------MKFMAEARLTLTKGTAKDIIERFYTRHG-IETLEGFDGMFVTQTLEQEDFDEVKILTVWKSKQAFTDWLKSDVFKAAHKHVRSKNEDESSPIINNKVITYDIGYSYM-------


General information:
TITO was launched using:
RESULT:

Template: 2ZDO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 355 1715 4.83 18.05
target 2D structure prediction score : 0.45
Monomeric hydrophicity matching model chain A : 0.61

3D Compatibility (PKB) : 4.83
2D Compatibility (Sec. Struct. Predict.) : 0.45
1D Compatibility (Hydrophobicity) : 0.61
QMean score : 0.464

(partial model without unconserved sides chains):
PDB file : Tito_2ZDO.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2ZDO-query.scw
PDB file : Tito_Scwrl_2ZDO.pdb: