Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRGFFVTGTDTEVGKTVISSGLAALLKEHNRDVGVYKPFLSGISRHHP----DSDTSLLKDMSQTSLSHEDITPFAFKAPLAPYVAGKLEGKTVTMEEVLSHWGRIREKHECFIVEGAGGISVPLGEDYLVSHVIKALQLPMIIVARPHLGTINHTFLTVKYAESMGLPIAGIIINGISDSPDEDEKTNPEMIERLCGVPILGVTPKLANVTKETVLHMVKDHINLSLLMNQMGV
1DAH Chain:A ((2-224))-KRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYKPVASG-SEKTPEGLRNSDALALQRNSSLQLDYATVNPYTFAEPTSPHIISAQEGRPIESLVMSAGLRALEQQADWVLVEGAGGWFTPLSDTFTFADWVTQEQLPVILVVGVKLGCINHAMLTAQVIQHAGLTLAGWVANDVT-PPGKRHAEYMTTLTRMIPAPLLGEIPWLAENPENAA---TGKYINLALL------


General information:
TITO was launched using:
RESULT:

Template: 1DAH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1192 -35346 -29.65 -161.40
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain A : 0.77

3D Compatibility (PKB) : -29.65
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.77
QMean score : 0.560

(partial model without unconserved sides chains):
PDB file : Tito_1DAH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1DAH-query.scw
PDB file : Tito_Scwrl_1DAH.pdb: