Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGSTQLTGRVIF-KGDPGYT----EAIKN--WNPYVDVYPLVFVFAQNSYDVSNAIKWARENKVPLRVRSGRHALDKNLSVVS----GGIVIDVSDMNKVFLDEENAIATVQTGIPVGPLVKGL--ARDGFMAPFGDSPTVGIGGITMGGGFGVLSRSIGLISDNLLALKTVDAKGRIIHADQSHNEDLLWASRGGGGGNFGYNTQYTFKVHRAPKTATVFNIIWPW-EQLETVFKAWQKWAPFVDERLGCYLEIYSKING-LCHAEGIFLGSKTELIRLLKPLLHAGTP----TEADIKTLYYPDAIDFLD------PDEPIPGRNDQSVKFSSAWGHDFWSDEPISIMRKFLED--ATGTEANFFFINWGGAISRVPKDETAFFWRH-PLFYTEWTASWKNKSQEDSNLASVERVRQLMQPYVAG----SYVNVPDQNI---------------ENFGKEYYGANFARLREIKAKYDPENVFRFPQSIPPSR
3TSH Chain:A ((18-495))----EIPPRLLYAKSSPAYPSVLGQTIRNSRWSSPDNVKPLYIITPTQVSHIQSAVVCGRRHSVRIRVRSGGHDYE-GLSYRSLQPETFAVVDLNKMRAVWVDGKARTAWVDSGAQLGELYYAIYKASPTLAFPAGVCPTIGVGGNFAGGGFGMLLRKYGIAAENVIDVKLVDANGK-LHDKKSMGDDHFWAVRGGGGESFGIVVAWQVKLLPVPPTVTIFKISKTVSEGAVDIINKWQVVAP----QLPADLMIRIIAQGPKATFEAMYLGT----CKTLTPLMSSKFPELGMNPSHCNEMSWIQSIPFVHLGHRDALEDDLLNRQNSFKPFAEYKSDYVYQPFPKTVWEQILNTWLVKPGAGIMIFDPYGATISATPESATPFPHRKGVLFNIQYVNYWFAPGAAAAPLSWSKDIYNYMEPYVSKNPRQAYANYRDIDLGRNEVVNDVSTYASGKVWGQKYFKGNFERLAITKGKVDPTDYFRNEQSIPP--


General information:
TITO was launched using:
RESULT:

Template: 3TSH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2533 -12486 -4.93 -28.97
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain A : 0.75

3D Compatibility (PKB) : -4.93
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.75
QMean score : 0.528

(partial model without unconserved sides chains):
PDB file : Tito_3TSH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3TSH-query.scw
PDB file : Tito_Scwrl_3TSH.pdb: