Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKTLRTLCVLMILSGVIFFGLKIDAKDIDIPFLNSLKKVVSDSDTDSAANSKKELKGSAKPLDVILYNQMDAPRLYNGCEVTSLAMVLNYAGYDVTKNTLANQVATVPLTYSSGLKGDPNDGFVGDMANGPGLGVYHRPIYQLAKTYAGDKVSDLTGKSISAVYQQLEKGNPVWVITTANFTPVDNMQTWKTPNGTIEITYSEHSVAVTGYDD--KYVYLNDPYGYKNRKTDRTSFEKAWKQMGSQAVVIQK
3ZUA Chain:A ((6-119))---------------------------------------------------------------------------KIDYGLYALEILAQYHNVSVNPEEIKHRFDTDG------------------------TGLGLTSWLLAAKSLEL-KVKQV-KKTID---RLNFISLPALVWRE----------------------DGRHF-ILTKVSKEANRYLIFDLEQRNPRVLEQSEFEALYQ-----------


General information:
TITO was launched using:
RESULT:

Template: 3ZUA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 495 -40791 -82.41 -364.20
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain A : 0.58

3D Compatibility (PKB) : -82.41
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.58
QMean score : 0.464

(partial model without unconserved sides chains):
PDB file : Tito_3ZUA.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3ZUA-query.scw
PDB file : Tito_Scwrl_3ZUA.pdb: