Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSMHKALTIAGSDSSGGAGIQADLKTFQEKNVYGMTALTVIVAMDPNNSWNHQVFPIDT---DTIRAQLATITDGIGVDAMKTGMLPTVDIIELAAKTIKEKQLKNVVIDPVMVCKGANEVLYPEHAQALRE--QLAPLATVITPNLFEASQLSGMDELKTVDDMIEAAKKIHALGAQYVVITGGGKLKHEKAVDV----LY-DGETAEVLESEMIDTPYTHGAGCTFSAAVTAELAKGAEVKEAIYAAKEFITAAIKESFPLNQYVGPTKHSALRLNQQS
4YL5 Chain:A ((14-245))------LCFSGLDPSGGAGLQADIEAIGQSGAHAAIACT---ALTIQNS--QQVFGFEATSKELLLAQANAVVGDLPIKCVKSGMLGTTDNIAALAEFLRAHPDYQYVLDPVLVANSGGSL--GDQATLVKAFVELIPLATLITPNTVELRALTG------VTDLDQATQKLFEMGAKAVLVKGG----HEDTPDFIKNSLYIDGELAASSTCP-----------CSLASFIAGRLALGDSLKIAVQHAETWLFGV-------------------------


General information:
TITO was launched using:
RESULT:

Template: 4YL5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1202 -17479 -14.54 -82.45
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain A : 0.75

3D Compatibility (PKB) : -14.54
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.75
QMean score : 0.464

(partial model without unconserved sides chains):
PDB file : Tito_4YL5.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4YL5-query.scw
PDB file : Tito_Scwrl_4YL5.pdb: