Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSLANIIDHTALKPHTQKADILKLIEEAKTYKFASVCVNPTWVELAAKELKGTGVDVCTVIGFPLGANTTETKAFETKDAISKGATEVDMVINIAALKDKEDDVVEADIRGVVEAVAGKALVKVIIET---CLLTDEEKE-RACRLAVSAGADFVKTSTGF-STGGATKEDIALMRKTVGPDIGVKASGGVRTKEDVDTMVEAGASRIGASAGVSIVKGENASGGDNY
3NG3 Chain:A ((12-225))--LAAFVDHTLLKPEATAADVAALVTEAAELGVYAVCVSPPMVPAAVQ--AGA--RVASVAGFPSGKHVSAVKAHEAALAVASGAAEIDMVIDVGAALAGDLDGVRADIAAVRGAVGG-AVLKVIVESSALLALADEHTLVRVCRAAEDAGADFVKTSTGFHPSGGASVRAVALMAEAVGGRLGVKASGGIRTAADALAMLDAGATRLGLSGTRAVLDG---------


General information:
TITO was launched using:
RESULT:

Template: 3NG3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1249 -77054 -61.69 -372.24
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain A : 0.82

3D Compatibility (PKB) : -61.69
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.82
QMean score : 0.538

(partial model without unconserved sides chains):
PDB file : Tito_3NG3.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3NG3-query.scw
PDB file : Tito_Scwrl_3NG3.pdb: