Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIMKMTHLNMKDFNKPNEPFVVFGRMIPAFENGVWTYTEERFSKPYFKQYEDDDMDVSYVEEEGKAAFLYYLENNCIGRIKIRSNWNGYALIEDIAVAKDYRKKGVGTALLHKAIEWAKENHFCGLMLETQDINISACHFYAKHHFIIGAVDTMLYSNFPTANEIAIFWYYKF
1Y9K Chain:A ((62-122))-------------------------------------------------------------------------------------------IMNIAVAEHLQGKGIGKKLLRHAVETAKGYGMSKLEVGTGNSSVSQLALYQKCGFRIFSID---------------------


General information:
TITO was launched using:
RESULT:

Template: 1Y9K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 131 -32002 -244.29 -524.61
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain A : 0.58

3D Compatibility (PKB) : -244.29
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.58
QMean score : 0.368

(partial model without unconserved sides chains):
PDB file : Tito_1Y9K.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1Y9K-query.scw
PDB file : Tito_Scwrl_1Y9K.pdb: