Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSEQVETRLTPRERLTRGLAYSAVGPVDVTRGLLELGVGLGLQSARSTAAGLRRRYREGRLAREVAAAQETLAQELTAAQDVVANLPQALQDARTQRRSKHHLWIFAGIAAAILAGGAVAFSIVRRSSRPEPSPRPPSVEVQPRS
3NF2 Chain:A ((92-125))
-------------------------------------------------------------------------------------LHDDLMDGDEQRRHRDTVWKVHGPAQAILVGDAL--------------------------
General information:
TITO was launched using:
RESULT:
Template:
3NF2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -16869 for 189 contacts (-89.3/contact) +
2D Compatibility (PS) -3562 + (NN) 176 + (LL) 7784
1D Compatibility (HY) -2400 + (ID) 700
Total energy: -15571.0 ( -82.39 by residue)
QMean score : 0.520
(partial model without unconserved sides chains):
PDB file :
Tito_3NF2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3NF2-query.scw
PDB file :
Tito_Scwrl_3NF2.pdb
: