Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQGLVLQLTRAGFLMLLWVFIWSVLRILKTDIYAPTGAVMMRRGLALRGTLLGARQRRHAARYLVVTEGALTGARITLSEQPVLIGRADDSTLVLTDDYASTRHARLSMRGSEWYVEDLGSTNGTYLDRAKVTTAVRVPIGTPVRIGKTAIELRP
3PO8 Chain:A ((14-95))
-----------------------------------------------------------------------SGRTYQLREGSNIIGRGQDAQFRLPDTGVSRRHLEIRWDGQVALLADLNSTNGTTVNNAPV-QEWQLADGDVIRLGHSEIIVR-
General information:
TITO was launched using:
RESULT:
Template:
3PO8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -51765 for 564 contacts (-91.8/contact) +
2D Compatibility (PS) -8930 + (NN) -2103 + (LL) 7168
1D Compatibility (HY) -5200 + (ID) 1350
Total energy: -62180.0 ( -110.25 by residue)
QMean score : 0.585
(partial model without unconserved sides chains):
PDB file :
Tito_3PO8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3PO8-query.scw
PDB file :
Tito_Scwrl_3PO8.pdb
: