Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAKWLGAPLARGVSTATRAKDSDRQDACRILDDALRDGELSMEEHRERVSAATKAVTLGDLQRLVADLQVESAPAQMPALKSRAKRTELGLLAAAFVASVLLGVGIGWGVYGNTRSPLDFTSDPGAKPDGIAPVVLTPPRQLHSLGGLTGLLEQTRKRFGDTMGYRLVIYPEYASLDRVDPADDRRVLAYTYRGGWGDATSSAKSIADVSVVDLSKFDAKTAVGIMRGAPETLGLKQSDVKSMYLIVEPVKDPTTPAALSLSLYVSSDYGGGYLVFAGDGTIKHVSYPS |
1ST6 Chain:A ((293-379)) | --------------------DAGEQAIRQILDEAGKAGELCAGKERREILGTCK--TLGQMTDQLADLRARGQGA-TPMAMQKAQQVSQGL------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1ST6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 2481 for 393 contacts (6.3/contact) +
2D Compatibility (PS) -7409 + (NN) -4487 + (LL) 11516
1D Compatibility (HY) -400 + (ID) 1100
Total energy: 601.0 ( 1.53 by residue)
QMean score : 0.527
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