Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAGDTTITIVGNLTADPELRFTPSGAAVANFTVASTPRIYDRQTGEWKDGEALFLRCNIWREAAENVAESLTRGARVIVSGRLKQRSFETREGEKRTVIEVEVDEIGPSLRYATAKVNKASRSGGFGSGSRPAPAQTSSASGDDPWGSAPASGSFGGGDDEPPF
3EIV Chain:A ((4-120))
---ETVITVVGNLVDDPELRFTPSGAAVAKFRVASTP-----------DGESLFLTCSVWRQAAENVAESLQRGMRVIVQGRLKQRS--------RTVYELDVDEVGASLRSATAKVTKT--------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3EIV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -59729 for 648 contacts (-92.2/contact) +
2D Compatibility (PS) -10936 + (NN) -5310 + (LL) 16
1D Compatibility (HY) -10800 + (ID) 3750
Total energy: -90509.0 ( -139.67 by residue)
QMean score : 0.538
(partial model without unconserved sides chains):
PDB file :
Tito_3EIV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3EIV-query.scw
PDB file :
Tito_Scwrl_3EIV.pdb
: