Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MCADAQPSGSVGLLGRNCPTATTRWRRAGEGLTAADTIEVKLWAGKPRLHPLVPKRAVGVLLAVAHGQVAKTPSATRAIAFRHVRLMRVRWICAGNRGRKHKRRCTTQYRSTQASKLQLHFKLRQTLNRLGGLQAMVSACG |
2CWD Chain:A ((4-20)) | -------------------------------------------------------------------------------------PVRVLFVCLGNICRSPM--------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2CWD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 1909 for 61 contacts (31.3/contact) +
2D Compatibility (PS) -1956 + (NN) -1243 + (LL) 8724
1D Compatibility (HY) -1600 + (ID) 300
Total energy: 5534.0 ( 90.72 by residue)
QMean score : -0.209
|
|
|