Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLFAALRDMQWRKRRLVITIISTGLIFGMTLVLTGLANGFRVEARHTVDSMGVDVFVVRSGAAGPFLGSIPFPDVDLARVAAEPGVMAAAPLGSVGTIMKEGTSTRNVTVFGAPEHGP--GMPRVSEGRSPS------KPDEVAASS----TMG---RHLGDTVEVGARRLRVVGIVPNSTALAKIPNVFLTTEGLQKLAYNGQPNITSIGIIGMPRQLPEGYQTFDRVGAVNDLVRPLKVAVNSISIVAVLLWIVAVLIVGSVVYLSALERLRDFAVFKAIGTPTRSIMAGLALQALVIALLAAVVGVVLAQVLAPLFPMIVAVPVGAYLALPVAAIVIGLFASVAGLKRVVTVDPAQAFGGP |
| 5F9Q Chain:A ((40-186)) | ----------------------------------------------------------------------SFTEEDINGLKGVDGVKQVVASAVKSMTARYHEEDTDITLNGINSGYMDVKKLDVQDGRTFTDNDFLSGKRAGIISKKMAEKLFGKTSPLGKIVWAGGQPVEVIGVLKE-----GLSEMYVPFNMLKTSFGT--NDYSNVSVQTESA--------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 5F9Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 15664 for 789 contacts (19.9/contact) +
2D Compatibility (PS) -12447 + (NN) -2320 + (LL) 20908
1D Compatibility (HY) 3600 + (ID) 500
Total energy: 24905.0 ( 31.57 by residue)
QMean score : 0.117
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