Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTLKVKGEGLGAQVTGVD-PKNLDDITTDEIRDIVYTNKLVVLKDVHP-SPREFIKLGRIIGQIVPYYEPMYHHEDHPEIFVSSTEEGQGVPKTGAFWHIDYMFMPEPFAFSMVLPLAVPGHDRGTYFIDLARVWQSLPAAKRDPARGTVSTHDPRRHIKIRPSDVYRPIGEVWDEINRTTPPIKWPTVIRHPKTGQEILYICATGTTKIE-DKDGNPVDPEVLQELMAATGQLDPEYQSPFIHTQHYQVGDIILWDNRVLMHRAKHGSAAGTLTTYRLTMLDGLKTPGYAA |
| 4CVY Chain:A ((5-254)) | ITVKKLGSRIGAQIDGVRLGGDLDPAAVNEIRAALLAHKVVFFRGQHQLDDAEQLAFAGLLGTPI------------------------------NRWHTDVTFAANYPAASVLRAVSLPSYGGSTLWANTAAAYAELPEPLKCLTENLWALHTN----------------------DFRT---EHPVVRVHPETGERTLLAGDFVRSFVGLDSHESRVLFEVLQRRITM-----PENTIRW----NWAPGDVAIWDNRATQHRA--------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4CVY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -108805 for 1500 contacts (-72.5/contact) +
2D Compatibility (PS) -21389 + (NN) -5392 + (LL) 4184
1D Compatibility (HY) -6000 + (ID) 2750
Total energy: -140152.0 ( -93.43 by residue)
QMean score : 0.451
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