Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQREIYDGEARLSWVLAALAGILGATAFTHSAG----YFVTFMTGNSQRAVLGLFGDDAWMSVTASLLILFFVAGVVIASVCRRHFWAAHPHGPTVLTTFSLIFAAGVDIMLGGWHESMLDFVPILFVVFGIGALNTSFVKDGEVSVPLSYVTGTLVKMGQGIERHLAGGKVEDWLGYFLLHASFVLGAAAGGAISMVVTGPQMLAVAAVVCAATTGYTYLHADRRGLVNQKRPQPGKRLFRALRRGELDSGTSTPATNYGSS |
1KN0 Chain:A ((25-208)) | CFGQCQYTAEEYQAIQKALRQRLGPEYISSRMAGGGQKVCYIEGHRVINLANEMFGYNGWAHSITQQNVDFVDLN---------------------NGKFYVGVCAFVRVQL----------------------------KDGSYHEDVGYGVSEGLKSKALSLEKARKEAVTDGLKRALRSFGNALGNC------------------------------ILDKDYLRSLNKLPRQLPLEVDLTKAKRQDLEPSVEEARYNSC |
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General information:
TITO was launched using:
| RESULT:
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Template: 1KN0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -100362 for 1176 contacts (-85.3/contact) +
2D Compatibility (PS) -18916 + (NN) -1699 + (LL) 6028
1D Compatibility (HY) 400 + (ID) 1450
Total energy: -115999.0 ( -98.64 by residue)
QMean score : 0.159
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