Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIALPALEGVEHRHVDVAEGVRIHVADAGPADGPAVMLVHGFPQNWWEWRDLIGPLAADGNRVLCPDLRGAGWSSAPR--SRYTKTEMADDLAAVLDGLGVAKVKLVAHDWGGPVAFIMMLRHPEKVTGFFGVNTVAPWVKRDLGM-----LRNMWRFWYQIPMSLPVIGPRVISDPKGRYFRLLTGWVGGGFRVPDDDVR----------LYLDCMREPGHAEAGSRWYRTFQTREM--------LRWLRGEYND---------ARVDVPVRWLHGTGDPVITPDLLDGYAERASDFEVELVDGVGHWIVEQRPELVLDRVRAFLAAGTEQRD |
| 1ZD5 Chain:A ((237-534)) | ---------MSHGYVTVKPRVRLHFVELG--SGPAVCLCHGFPESWYSWRYQIPALAQAGYRVLAMDMKGYGESSAPPEIEEYCMEVLCKEMVTFLDKLGLSQAVFIGHDWGGMLVWYMALFYPERVRAVASLNT--PFIPANPNMSPLESIKANPVFDYQLYFQEPGVAEAELEQNLSRTFKSL-------FRASDESVLSMHKVCEAGGLFVNSPEEPSLSRMVTEEEIQFYVQQFKKSGFRGPLNWYRNMERNWKWACKSLGRKILIPALMVTAEKDFVLVPQMSQHMEDWIPHLKRGHIEDCGHWTQMDKPTEV---------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1ZD5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -161579 for 2213 contacts (-73.0/contact) +
2D Compatibility (PS) -27805 + (NN) -9349 + (LL) 2256
1D Compatibility (HY) -17600 + (ID) 3950
Total energy: -218027.0 ( -98.52 by residue)
QMean score : 0.397
|
|
|