Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTDESSVRTPKALPDGVSQATVGVRGGML-RSGFEETAEAMYLTSGYVYGSAAVAEKSFAGELDHYVYSRYGNPTVSVFEERLRLIEGAPAAFATASGMAAVFTSLGALLGAGDRLVAARSLFGSCFVVCSEILPRWGVQTVFVDGDDLSQWERALSVPTQAVFFETPSNPMQSLVDIAAVTELAHAAGAK--VVLDNVFATPLLQQGFPLGVDVVVYSGTKHIDGQGRVLGGAILGDREYIDG-PVQKLMRHTGPAMSAFNAWVLLKGLETLAIRVQHSNASAQRIAEFLNGHPSVRWVRYPYLPSHPQYDLAKRQMSGGGTVVTFALDCPEDVAKQRAFEVLDKMRLIDISNNLGDAKSLVTHPATTTHRAMGPEGRAAIGLGDGVVRISVGLEDTDDLIADIDRALS |
5DX5 Chain:A ((10-395)) | -------------------ATKAIHGGHIGDKQFGSLATPIYQTSTFIFDSAEQGGRRFAGEESGYIYSRLGNPTSTEVENKLALLEGGEAAVVAASGMGAIAASLWSALKSGDHVVASDTLYGCTFALLNHGLTRYGVEVTFVDVSNLDEVKNALKPNTKVVYLETPANPTLKVTDIRKISNMVHESNKECFVFVDNTFCTPYIQRPLELGADVVVHSATKYLNGHGDVIAGFAVGKEEFINQVKLFGIKDMTGSVTGPFESFLIIRGMKTLQLRMEKHCKNAMEVAKFLESHPAVEKVYYPGLESFKYYQLAREQMKLPGAMISFELKGGVEEGKI----VMNNVKLATLAVSLGDSETLIQHPASMTHSPYTAEERKAAGISDGLVRLSVGLEDAEDIIDDLKQAL- |
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General information:
TITO was launched using:
| RESULT:
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Template: 5DX5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -227482 for 3402 contacts (-66.9/contact) +
2D Compatibility (PS) -41894 + (NN) -25332 + (LL) 1168
1D Compatibility (HY) -30800 + (ID) 7300
Total energy: -331640.0 ( -97.48 by residue)
QMean score : 0.460
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