Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MVNKSRMMPAVLAVAVVVAFLTTGCIRWSTQSRPVVNGPAAAEFAVALRNRVSTDAMMAHLSKLQDIANANDGTRAVGTPGYQASVDYVVNTLRNSGFDVQTPEFSARVFKAEKGV-VTLGGNTVEARALEYSLGTPPDGVTGPLVAAPADDSPGCSPSDYDRLPVSGAVVLVDRGVCPFAQKEDAAAQRGAVALIIADNIDEQAMGGTLGANTDVKIPVVSVTKSVGFQLR-----GQSGPTTVKLT-ASTQSFKARNVIAQTK----TGSSANVVMAGAHLDSVPEGPGINDNGSGVAAVLETAVQLGNSPHVSNAVRFAFWGAEEFGLIGSRNYVESLDIDALKGIALYLNFDMLASPNPG---YFTYDGDQSLPLD------ARGQPVVPEGSAGIERTFVAYLKMAGKTAQDTSFDGRSDYDGFTLAGIPSGGLFSGAEVKKSAEQAELWGGTADEPFDPNYHQKTDTLDHIDRTALGINGAGVAYAVGLYAQDLGGPNGVPVMADRTRHLIAKP |
2EK8 Chain:A ((30-385)) | --------------------------------------------------------------------------RVAGSPEELKAVRYIEQQFKSYGYHVEVQPFQFEGYTAPSEVTLKIGTEKKEGEAFTYS---PNSDVTAELVYVGLGTTADVAGKD-----LNGKIALIQRGNISFADKVRNAAKQGAKAVIIYNNTDGK-LNGTLGGSDASFVAAVGITKQEGDALAANLRAGEKITATVKVAGAEVKTLTSHNVIATKKPDANKKNTNDIIIIGSHHDSVEKAPGANDDASGVAVTLELA-RVMSKLKTDTELRFITFGAEENGLIGSKKYAASLSEDEIKRTIGMFQLDMVGSKDAGDLIMYTIDGKKNRVTDLGAAASSRLSGVLPYGQ-----------------------EGRSDHESFHALGIPA-ALFIHA------------------PVEPWYHTPNDTLDKISKEKL-------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2EK8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -102721 for 2854 contacts (-36.0/contact) +
2D Compatibility (PS) -35950 + (NN) -10458 + (LL) 11140
1D Compatibility (HY) -17600 + (ID) 6050
Total energy: -161639.0 ( -56.64 by residue)
QMean score : 0.453
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