Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MHHSFAYRSYSWYVDVDNLPQLPWWLRPFARFHADDHFADPFSCPPHSSLRDRLDAFFAARGLAVPDGRITALLQARVLGYVFNPLSIFWCHDRDGQLRHVIAEVHNTYGGR-HAYLLPPADLPVVTAKNFYVSPFHQLAGYYLIRAPRPDRELDVTVTLHRDRRQVCPEFTATLRGQRRPATTRQIAMMQIISPLAPMVVAARIRIQGIRLWLRRVPVVPR |
4YG0 Chain:A ((16-50)) | ------------------------------------------------------------------------------------PSNYWYLINP--LNDGVVFSVTNNSTFWMFTYLILPN----------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4YG0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -4634 for 110 contacts (-42.1/contact) +
2D Compatibility (PS) -3321 + (NN) 37 + (LL) 13592
1D Compatibility (HY) -2800 + (ID) 350
Total energy: 2524.0 ( 22.95 by residue)
QMean score : -0.093
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