Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-------------MGSVIKKRRKR--MSKKKHRKLLRRTRVQRRKLGK-----------------------
4PU7 Chain:A ((17-87))
LETIMASPLNQQSLGLLIKERRKSAALTQDVAAMLCGVTKKTLIRVEKGEDVYISTVFKILDGLGIDIVSA
General information:
TITO was launched using:
RESULT:
Template:
4PU7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 24147 for 184 contacts (131.2/contact) +
2D Compatibility (PS) -3516 + (NN) -2509 + (LL) 0
1D Compatibility (HY) -2400 + (ID) 450
Total energy: 15272.0 ( 83.00 by residue)
QMean score : 0.351
(partial model without unconserved sides chains):
PDB file :
Tito_4PU7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4PU7-query.scw
PDB file :
Tito_Scwrl_4PU7.pdb
: