Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVIDTSALVAMLSDEPDAERFEAAVE-ADHIRLMSTASYLETALVIEARFGEP-GGRELDLWLHRAAVDLVAVHADQADAARAAYRTYGKGRHRAGLNYGDCFSYGLAKISGQPLLFKG-EDFQHTDIATVALP
5ECD Chain:A ((10-137))
FMLDTNICIFTIKNKPAS--VRERFNLNQGKMCISSVTLMELIYGAEKSQMPERNLAVIEGFVS--RIDVLDYDAAAATHTGQIRAELARQGR--PVGPFNQMIAGHARSRGLIIVTNNTREFERVGGLRTEDW
General information:
TITO was launched using:
RESULT:
Template:
5ECD.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -61309 for 962 contacts (-63.7/contact) +
2D Compatibility (PS) -13528 + (NN) -3721 + (LL) 692
1D Compatibility (HY) -4000 + (ID) 650
Total energy: -82516.0 ( -85.78 by residue)
QMean score : 0.396
(partial model without unconserved sides chains):
PDB file :
Tito_5ECD.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-5ECD-query.scw
PDB file :
Tito_Scwrl_5ECD.pdb
: