Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTQTTQSPALIASQSSWRCVQAHDREGWLALMADDVVIEDPIGKSVTNPDGSGIKGKEAVGAFFDTHIAANRLTVTCEETFP-SSSPDEIAHILVLHSEFDGGFTSEVRGVFTYRVNKAGLITNMRGYWNLDMMTFGNQE
3NHX Chain:A ((12-116))
-------------QRYVAALNAGDLDGIVALFADDATVEDPVG---SEPR----SGTAAIREFYANSL---KLPLAVELTQEVRAVANEAAFAFTVSFEYQGRKTV-VAPINHFRFNGAGKVVSMRALF-----------
General information:
TITO was launched using:
RESULT:
Template:
3NHX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -58179 for 682 contacts (-85.3/contact) +
2D Compatibility (PS) -11153 + (NN) -3228 + (LL) 2040
1D Compatibility (HY) -6400 + (ID) 1600
Total energy: -78520.0 ( -115.13 by residue)
QMean score : 0.538
(partial model without unconserved sides chains):
PDB file :
Tito_3NHX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3NHX-query.scw
PDB file :
Tito_Scwrl_3NHX.pdb
: