Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MARCDVLVSADWAESNLHAPKVVFVEVDEDTSAYDRDHIAGAIKLDWRT--DLQDPVKRDFVDAQQFSKLLSERGIANEDTVILYGGNN--NWFAAYAYWYFKLYGHEKVKLLDGGRKKWELDGRPLSSDPVSRPVTSYTASPPDNTIRAFRDEVLAAINVK--NLIDVRSPDEFSGKILAPAHLPQEQSQRPGHIPGAINVPWSRAANEDGTFKSDEELAKLYADAGLDNSKETIAYCRIGERSSHTWFVLRELLGHQNVKNYDGSWTEYGSLVGAPIELGS |
| 2ORA Chain:A ((42-278)) | ----------------------------EARKEYLERHVPGASFFDIEECRDKASPYEVMLPSEAGFADYVGSLGISNDTHVVVYDGDDLGSFYAPRVWWMFRVFGHRTVSVLNGGFRNWLKEGHPVTSEP-SRPEPAIFKATLNRSLLKTYEQVLENLESKRFQLVDSRA----QGRYLGTQPEPDAVGLDSGHIRGSVNMPFMNFLTEDGFEKSPEELRAMFEAKKVDLTKPLIATCRKGVTACHIALAAY-LCGKPDVAIYDGSWFEW------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2ORA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -37012 for 1728 contacts (-21.4/contact) +
2D Compatibility (PS) -24762 + (NN) -12995 + (LL) 3264
1D Compatibility (HY) -12000 + (ID) 2950
Total energy: -86455.0 ( -50.03 by residue)
QMean score : 0.397
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