Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSNPQPEKVRVVVGDDHPLFREGVVRALSLSGSVNVVGEADDGAAALELIKAHLPDVALLDYRMPGMDGAQVAAAVRSYELPTRVLLISAHDEPAIVYQALQQGAAGFLLKDSTRTEIVKAVLDCAKGRDVVAPSLVGGLAGEIRQRAAPVAPVLSAREREVLNRIACGQSIPAIAAELYVAPSTVKTHVQRLYEKLGVSDRAAAVAEAMRQRLLD
5F64 Chain:A ((1-203))
--------MNAIIIDDHPL-AIAAIRNLLIKNDIEILAELTEGGSAVQRVETLKPDIVIIDVDIPGVNGIQVLETLRKRQYSGIIIIVSAKNDHFYGKHCADAGANGFVSKKEGMNNIIAAI-EAAKNGYCYFPFSLNRFVGSLTSDQQKLDS-LSKQEISVMRYILDGKDNNDIAEKMFISNKTVSTYKSRLMEKLECKSLMDLYTFAQRNKI--
General information:
TITO was launched using:
RESULT:
Template:
5F64.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -101584 for 1603 contacts (-63.4/contact) +
2D Compatibility (PS) -22617 + (NN) -14423 + (LL) 708
1D Compatibility (HY) -14800 + (ID) 2500
Total energy: -155216.0 ( -96.83 by residue)
QMean score : 0.533
(partial model without unconserved sides chains):
PDB file :
Tito_5F64.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-5F64-query.scw
PDB file :
Tito_Scwrl_5F64.pdb
: