Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAEPLLVVGLGNPGANYARTRHNLGFVVADLLAARLGAKFKAHKRSGAEVATGRSAGRSLVLAKPRCYMNESGRQIGPLAKFYSVAPANIIVIHDDLDLEFGRIRLKIGGGEGGHNGLRSVVAALGTKDFQRVRIGIGRPPGRKDPAAFVLENFTPAERAEVPTICEQAADATELLIEQGMEPAQNRVHAW
3KK0 Chain:A ((1-191))
MAEPLLVVGLGNPGPTYAKTRHNLGFMVADVLAGRIGSAFKVHKKSGAEVVTGRLAGTTVVLAKPRISMNESGRQVGPLAKFYSVPPQQIVVIHDELDIDFGRIRLKLGGGEGGHNGLRSVASALGTKNFHRVRIGVGRPPGRKDPAAFVLENFTSAERAEVPTIVEQAADATELLIAQGLEPAQNTVHAW
General information:
TITO was launched using:
RESULT:
Template:
3KK0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -71991 for 1256 contacts (-57.3/contact) +
2D Compatibility (PS) -20562 + (NN) -5570 + (LL) 0
1D Compatibility (HY) -21600 + (ID) 7700
Total energy: -127423.0 ( -101.45 by residue)
QMean score : 0.560
(partial model without unconserved sides chains):
PDB file :
Tito_3KK0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3KK0-query.scw
PDB file :
Tito_Scwrl_3KK0.pdb
: