Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNGAAPTNGAPLSYPSICEGVHWGHLVGGHQPAY
4OY6 Chain:A ((57-74))
----------AGDFEAVV--PDGQLCSGGR----
General information:
TITO was launched using:
RESULT:
Template:
4OY6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5634 for 70 contacts (-80.5/contact) +
2D Compatibility (PS) -1939 + (NN) -1173 + (LL) 196
1D Compatibility (HY) 0 + (ID) 100
Total energy: -8650.0 ( -123.57 by residue)
QMean score : -0.156
(partial model without unconserved sides chains):
PDB file :
Tito_4OY6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4OY6-query.scw
PDB file :
Tito_Scwrl_4OY6.pdb
: