Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MCSRMADE--PRLEAGAHPF-----EEGRDKAPELRATQMDHVRFT------EGRRERNRDRLERSQQFRQPGR
2AKK Chain:A ((1-74))
MSIEVRDCNGALLADGDNVSLIKDLKLKGSSTVLKRGTMIRGIRLTDSEDEIEGRTDKIKGLVLRTEFLKKAGS
General information:
TITO was launched using:
RESULT:
Template:
2AKK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 22825 for 346 contacts (66.0/contact) +
2D Compatibility (PS) -5991 + (NN) 2095 + (LL) 0
1D Compatibility (HY) -2000 + (ID) 650
Total energy: 16279.0 ( 47.05 by residue)
QMean score : 0.199
(partial model without unconserved sides chains):
PDB file :
Tito_2AKK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2AKK-query.scw
PDB file :
Tito_Scwrl_2AKK.pdb
: