Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNELLHLAPNVWPRNTTRDEVGVVCIAGIPLTQLAQEYGTPLFVIDEDDFRSRCRETAAAFGSGANV--HYAAKAFLCSEVARWISEEGLCLDVCTGGELAVALHASFPPERITLHGNNKSVSELTAAVKAGVGHIVVDSMTEIERLDAIAGEAGIVQDVLVRLTVGVEAHTHEFISTAHEDQKFGLSVASGAAMAAVRRVFATDHLRLVGLHSHIGSQIFDVDGFELAAHRVIGLLRDVVGEFGPEKTAQIATVDLGGGLGISYLPSDDPPPIAELAAKLGTIVSDESTAVGLPTPKLVVEPGRAIAGPGTITLYEVGTVKDVDVSATAHRRYVSVDGGMSDNIRTALYGAQYDVRLVSRVSDAPPVPARLVGKHCESGDIIVRDTWVPDDIRPGDLVAVAATGAYCYSLSSRYNMVGRPAVVAVHA-GNARLVLRRETVDDLLSLEVR |
2YXX Chain:A ((4-382)) | ------------------------------LRKVAEIHGTPTYVYFEETLRKRSRLVKEVF-EGVNLLPTFAVKANNNPVLLKILREEGFGMDVVTKGELLAAKLAGVPSHTVVWNGNGKSRDQMEHFLREDVRIVNVDSFEEMEIWRELNPEG---VEYFIRVNPEVDAKTHPHISTGLKKHKFGIPLED---LDSFMERFRSMNIR--GLHVHIGSQITRVEPFVEAFSKVV----RASERYGFEE------INIGGGWGINYSGEE-----LDLSSYREKVVPDLKRF-----KRVIVEIGRYIVAPSGYLLLRVVLVK-----RRHNKAFVVVDGGMNVLIRPALYSAYHRIFVLGK--QGKEMRADVVGPLCESGDVIAYDRELPE-VEPGDIIAVENAGAYGYTMSNNYNSTTRPAEVLVRENGRISLIRRRETEMDIFK---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YXX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -250376 for 3200 contacts (-78.2/contact) +
2D Compatibility (PS) -40503 + (NN) -14400 + (LL) 4100
1D Compatibility (HY) -27600 + (ID) 6650
Total energy: -335429.0 ( -104.82 by residue)
QMean score : 0.497
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