Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPSLDNTADEKPAIDPILLKVLDAVPFRLSIDD-GIEAVRQRLRDL----PRQPVHPELRVVDLAIDGPAGPIGTRIYWPPTCPDQAEAPVVLYFHGGGFVMGDLDTHDGTCRQHAVGADAIVVSVDYRLAPEHPYPAAIEDAWAATRWVAEHGRQVGADLGRIAVAGDSAGGTIAAVIAQRARDMGGPPIVFQLLWYPSTLWDQSLPSLAENADAPILDVKAIAAFS----RWYAGEIDLHNPPAPMAPGRAENLADLPPAYIAVAGYDPLRDDGIRYGELLAAAGVPVEVHNAQTLVHGYVGYAGVVPAATEATNRGLVALRVVLHG |
3AIO Chain:A ((41-322)) | ---------------------------------ASVEEIRSLFKQFSSLTPREEVG---KIEDITIPGSETNIKARVYYPKT---QGPYGVLVYYHGGGFVLGDIESYDPLCRAITNSCQCVTISVDYRLAPENKFPAAVVDSFDALKWVYNNSEKFNGKYG-IAVGGDSAGGNLAAVTAILSKKE-NIKLKYQVLIYPAVSFDLITKSLYDNGEGFFLTREHIDWFGQQYLRSFADLLDFRFSPI------LADLNDLPPALIITAEHDPLRDQGEAYANKLLQSGVQVTSVKFNNVIHGFVSFFPFIEQGRDAIGLIGYVLRKVFYG |
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General information:
TITO was launched using:
| RESULT:
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Template: 3AIO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -187770 for 2471 contacts (-76.0/contact) +
2D Compatibility (PS) -30041 + (NN) -18842 + (LL) 1788
1D Compatibility (HY) -22400 + (ID) 4950
Total energy: -262215.0 ( -106.12 by residue)
QMean score : 0.528
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