Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTILEIKDLHVSVENPAEADHEIPILRGVDLTVKSGETHALMGPNGSGKSTLSYAIAGHPKYHVTSGTITLDGADVLAMS-IDERARAGLFLAMQYPVEVPGVSMSNFLRSAATAIRGEPPKLRHWVKEVKAAMAALDIDPAFAERSVNEG---FSGGEKKRHEILQLELLKPKIAILDETDSGLDVDALRVVSEGVNRYAESQHGGILLITHYTRILRYIHPEYVHVFVGGRIVESGGSELADELDQNGYVRFSPASGRYPHQPAPTGA |
4AYT Chain:A ((342-566)) | ---LEFKNVHFAY--PARP--EVPIFQDFSLSIPSGSVTALVGPSGSGKSTVLSLLL--RLYDPASGTISLDGHDIRQLNPVWLRSKIG--TVSQEPILFSCSIAENIAYGADDPSSVTAEEIQR-VAEVANAVAFIRNFPQGFNTVVGEKGVLLSGGQKQRIAIARALLKNPKILLLDEATSALDAENEYLVQEALDRLMDGRT--VLVIAH--RLSTIKNANMVAVLDQGKITEYGKHE----------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4AYT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -70570 for 1739 contacts (-40.6/contact) +
2D Compatibility (PS) -23427 + (NN) -6466 + (LL) 1304
1D Compatibility (HY) -12400 + (ID) 3750
Total energy: -115309.0 ( -66.31 by residue)
QMean score : 0.512
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