Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPVALIWLIAALVLVGAEALTGDMFLLMLGGGALAASVSSWLLAWPMWADGAVFLLVSVLLLVLVRPAVRRRLTQTKGVQLGIEALEGKKAVVLGRVA-RDGGQVKLDGQ----VWTARPLNDGDVFEPGDSVTVVQIDGATAVVFKDV
2K14 Chain:A ((13-81))
------------------------------------------------------------------------------LAYREDDLRGRLGKVITAVPVDGFGEVVIEGIGGTISKSAVSFDN-QQISYGTTVLVVDINNGVLSVTPH-
General information:
TITO was launched using:
RESULT:
Template:
2K14.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -24868 for 437 contacts (-56.9/contact) +
2D Compatibility (PS) -6802 + (NN) 1626 + (LL) 7920
1D Compatibility (HY) -3200 + (ID) 700
Total energy: -26024.0 ( -59.55 by residue)
QMean score : 0.513
(partial model without unconserved sides chains):
PDB file :
Tito_2K14.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2K14-query.scw
PDB file :
Tito_Scwrl_2K14.pdb
: