Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MMAASHDDDTVDGLATAVRGGDRAALPRAITLVESTRPDHREQAQQLLLRLL--------PDSGN--AHRVGITGVPGVGKSTAIEALGMHLIERGHRVAVLAVDPSSTRTGGSILGDKTRMARLAVHPNAYIRPSPTSGTLGGVTRATRETVVLLEAAGFDVILIETVGVGQSEVAVANMVDTFVLLTLARTGDQLQGIKKGVLELADIVVVNKADGEHHKEARLAARELSAAIRLIYPREALWRPPVLTMSAVEGRGLAELWDTVERHRQVLTGAGEFDARRRDQQVDWTWQLVRDAVLDRVWSNPTVRKVRSELERRVRAGELTPALAAQQILEIANLTDR |
| 2WWW Chain:A ((17-343)) | ----------VDKLYTGLIQGQRACLAEAITLVESTHSRKKELAQVLLQKVLLYHREQEQSNKGKPLAFRVGLSGPPGAGKSTFIEYFGKMLTERGHKLSVLAVDP----------------TELSRDMNAYIRPS---------TRTTNEAILLCEGAGYDIILIETVGV--SEFAVADMVDMFVLLLPPA------------IEMADLVAVTKSDGDLIVPARRIQAEYVSALKLLR-----WKPKVIRISARSGEGISEMWDKMKDFQDLMLASGELTAKRRKQQKVWMWNLIQESVLEHFRTHPTVREQIPLLEQKVLIGALSPGLAADFLLK------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2WWW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -176764 for 1989 contacts (-88.9/contact) +
2D Compatibility (PS) -31043 + (NN) -17359 + (LL) 1916
1D Compatibility (HY) -24800 + (ID) 6700
Total energy: -254750.0 ( -128.08 by residue)
QMean score : 0.645
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