Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTEFDDIKNLSLPETRDAAKQLLDSVAGDLTGEAAQRFQALTRHAEELRAEQRRRGREAEEALRRYRAGELRVVPGAPTGGDDGDAPPGNSLRDTAFRTLDSCVRDGLMSSRAAETAETLCRTGPPQSTSWAQRWLAATGSRDYLGAFVKRVSNPVAGHTVWTDREAAAWREAAAVAAEQRAMGLVDTQGGFLIPAALDPAILLSGDGSTNPIRQVARVVQTTSEI--WRGVTSEGAEARWYSEAQEVSDDSPALAQPAVPNYRGSCWIPFSIELEGDAASFVGEIGKILADSVEQLQAAAFVNGSGNG-EPTGFVSALTGTSDQVVVGAGSEAIVAADVYALQSALPPRFQASAAFAANLSTINTLRQAETSNGALKF-PSLHDS-PPMLAGKSVLEVSHMDTVDSAVTATNHPLVLGDWK-QFLIGDRVGSMVELVPH--LFGPNRRPTGQRGFFAWFRVGSDVLVRNAFRVLKVETTA |
| 1OHG Chain:A ((6-281)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ADSAGSLIQPMQIPGIIM-PGLRRLT-IRDLLAQGRTSSNALEYVREEVFTNNADVVAEKALKPESDITFSKQTANVKTIAHWVQASRQVMDDAPMLQSYINNRLMYGLALKEEGQLLNGDGTGDNLEGLNKVATAYD---TSLNATGDTRADIIAHAIYQVTESEFSASGIVLNPRDWHNIALLKDNEGRYIFGGPQ-AFTSNIMWGLPVVPTKAQAA-------G--TFTVGGFDMASQVWDRMDATVEVSREDRDNF----VKNMLTILCEERLALAHYRPTAIIKGTFSSG- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1OHG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -93407 for 2046 contacts (-45.7/contact) +
2D Compatibility (PS) -28440 + (NN) -5904 + (LL) 12808
1D Compatibility (HY) -1600 + (ID) 1800
Total energy: -118343.0 ( -57.84 by residue)
QMean score : 0.191
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