Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MADIPYGTDYPDAPWIDRDGHVLIDDGGKPTQVHRGQARIAYRLAERYQDKLLHVAGIGWHSWDGRRWAADDRGEAKRAVLAELRQALSDSLNDKELRADVRKCESASGVAGVLDLAAALVPFAATVADLDSDPHLLNVANGTLDLHTLKLRPHAPADRITKICRGAYQSDTESPLWQAFLTRVLPDEGVRGFVQRLAGVGLLGTVREHVLAILIGVGANGKSVFDKAIRYALGDYACTAE------PDLFMHRENAHPT---GEMDLRGVRWVAVSESEKDRRLAESTIKRLTGGD-TIRARKMRQDFVEFTPSHTPLLITNHLPRVPGDDTAIWRRIRVVPFEVVIPADEQDRELDARLQLEADSILSWAVAGWSDYQRIGLSQPDAVLAATSNYREDSDTIKRFIDDECVTSSPVLKATTTHLFEAWQRWRVQEGVPEISRKAFGQSLDTHGYPVTDKARDGRWRAGIAVRGADDFDD |
| 5C3C Chain:A ((47-197)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RIPMMLKGPTGCGKSRFVEHMAWKLNRPLITIACNEDMTASDLVGR------DGPLTVAARIGAICYLDEIVEARQDTIVVIHPLTDHRRVLPLEK-KGELVEAHPDFQIVISYNP-----DLKQSTKQRFGALDFD---------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 5C3C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -33060 for 813 contacts (-40.7/contact) +
2D Compatibility (PS) -12817 + (NN) -3799 + (LL) 21872
1D Compatibility (HY) -4000 + (ID) 1100
Total energy: -32904.0 ( -40.47 by residue)
QMean score : 0.287
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