Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTQAATRPTNDAGQDGGNNSDILVVARQQVLQRGEGLNQDQVLAVLQLPDDRLEELLALAHEVRMRWCGPEVEVEGIISLKTGGCPEDCHFCSQSGLFASPVRSAWLDIPSLVEAAKQTAKSGATEFCIVAAVRGPDERLMAQVAAGIEAIRNEVEINIACSLGMLTAEQVDQLAARGVHRYNHNLETARSFFANVVTTHT-WEERWQTLSMVRDAGMEVCCGGILGM-GETLQQRAEFAAELAELGPDEVPLNFLNPRPGTPFADLEVMPVGDALKAVAAFRLALPRTMLR--------FAGGREITLGDLGAKRGILGGINAVIVGNYLTTLGRPAEADLELLDELQMPLKALNASL |
4JY8 Chain:A ((43-293)) | -----------------------------------------------------EALFKLADEIRRKYVGDEVHIRAIIEF-SNVCRKNCLYCGLRRDNKN-LKRYRMTPEEIVERARLAVQFGAKTIVLQS---GEDPYYMPDVISDIVKEIKKMGVAVTLSLGEWPREYYEKWKEAGADRYLLRHETANPVLHRKLRPDTSFENRLNCLLTLKELGYETGAGSMVGLPGQTIDDLVDDLLFLKEHDFDMVGIGPFIPHPDTPLANEKKGDFTLTLKMVALTRILLPDSNIPATTAMGTIVPGGREITL-------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4JY8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -132738 for 1886 contacts (-70.4/contact) +
2D Compatibility (PS) -27226 + (NN) -21409 + (LL) 6340
1D Compatibility (HY) -15200 + (ID) 3350
Total energy: -193583.0 ( -102.64 by residue)
QMean score : 0.555
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