Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTRSGHPVTLDDLPLRADLRGKAPYGAPQLAVP--VRLNTNEN---PHPPTRALVDDVVRSVREAAIDLHRYPDRDAVALRADLAGYLTAQTGIQLGVENIWAANGSNEILQQLLQAFGGPGRSAIGFVPSYSMHPIISDGTHTEWIEASRANDFGLDVDVAVAAVVDRKPDVVFIASPNNPSGQSVSLPDLCKLLDVAPG--IAIVDEAYGEF---SSQPSAVSLVEEYPSKLVVTRTMSKAFAFAGGRLGYLIATPAVIDAMLLVRLPYHLSSVTQAAARAALRHSDDTLSSVAALIAERERVTTSLNDMGFRVIPSDANFVLFGEFADAPAAWRRYLEAGILIRDVGIPGYLRATTGLAEENDAFLRASARIATDLVPVTRSPVGAP |
4R2N Chain:A ((6-353)) | --------------LRPELAG-LPVYVPGKTVPGAIKLASNETVFGPLPSVRAAIDRATDTV-------NRYPDNGCVQLKAALARHL----GPDFAPEHVAVGCGSVSLCQQLVQVTASVGDEVVFGWRSFELYPPQVRVAGAIPIQVP-LTDHTFDLYAMLATVTDRT-RLIFVCNPNNPTSTVVGPDALARFVEAVPAHILIAIDEAYVEYIRDGMRPDSLGLVRAH-NNVVVLRTFSKAYGLAGLRIGYAIGHPDVITALDKVYVPFTVSSIGQAAAIASLDAADELLARTDTVVAERARVSAELRAAGFTLPPSQANFVWLPLGSRTQDFVEQAADARIVVRPYGTDG-VRVTVAAPEENDAFLRFARRWRSD------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4R2N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -180062 for 2843 contacts (-63.3/contact) +
2D Compatibility (PS) -37112 + (NN) -22657 + (LL) 1936
1D Compatibility (HY) -19600 + (ID) 6050
Total energy: -263545.0 ( -92.70 by residue)
QMean score : 0.533
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