Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTTTQTAKASRRARIERRTRESDIVIELDLD-----GTGQVAVDTGVPFYDHMLTALGSHASFDLTVRATGDVEIEAHHTIEDTAIALGTALGQALGDKRGIRRFGDAFIPMDETLAHAAVDLSGRPYCVHTGEPDHLQHTTIAGSSVPYHTVINRHVFESLAANARIALHVRVLYGRDPHHITEAQYKAVARALRQAVEPDPRVSGVPSTKGAL
1RHY Chain:A ((2-187))
--------SERIASVERTTSETHISCTIDLDHIPGVTEQKINVSTGIGFLDHMFTALAKHGGMSLQLQCKGDL------TAEDCALALGEAFKKALGERKGIKRYGYAYAPLDESLSRAVIDISSRPYFM-----CHLPFTREKVGDLSTEMV--SHLLQSFAFAAGVTLHIDSIRGENNHHIAESAFKALALAIRMAI---SR-----------
General information:
TITO was launched using:
RESULT:
Template:
1RHY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -134278 for 1503 contacts (-89.3/contact) +
2D Compatibility (PS) -18512 + (NN) -3933 + (LL) 1568
1D Compatibility (HY) -15600 + (ID) 3600
Total energy: -174355.0 ( -116.00 by residue)
QMean score : 0.407
(partial model without unconserved sides chains):
PDB file :
Tito_1RHY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1RHY-query.scw
PDB file :
Tito_Scwrl_1RHY.pdb
: