Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MACGVGISGCAIGSAIVLASIVAGVIDPANPGMAGLRRWLGPLSILLVLWGLRASIQWLQARLAQRGASAVIADLSGQVLTAVTARRPSQLAAQRDAAAVLITRGLDGLRPYFTGYLPTLLLAAILTPATVAVIGLYDLKSMAIVVITLPLIPIFMVLIGLATT-NPSAAALAAMTAVQARLL-DLIAGIPTLRALGRASGPEQRIAELSADHRRSAMATLRIAFLSALVLELLAT-LGVALVAVGIGLRLVFG-------EMSLTAGLTVLLLAPEVYWPLRRVGVQFHAAADGRTAADKAFALLGESPSPTPGRRTVTARG--GVIRLERLSVRGRDGRAPY--DLTADIEPGRVTVLTGRNGAGKSTTLQAIAGLTAPSSGRITVAGVDVTNLAPAAWWRQLSWLPQRPVLVPGTVRHNLVL---LGPVDDLERACAAAGFDAVLDELPRGLDTVLGRGGVGLSLGQRQRLGLARALGSPAAVLLLDEPTAHLDARTEQHVLGAIVERARAGATVLVVAHRQQVAAAGDRVVEVNSDGFRR |
| 4Q4A Chain:A ((148-548)) | ---------------------------------------------------------------------------------------------------------------------PLLFVGGIVMAVSINV------KLSSVLIFLIP--PIVLLFVWLTKKGNPLFRKIQESTDEVNRVVRENLLGVRVVRAFRRE--------EYENENFRKANESLRRSIISAFSLIVFALPLFIFIVNMGMIAVLWFGGVLVRNNQMEIGSIMAYTNYLMQIMFSLMMIGNILNFIVRASASAKRVLEVLNEKPAIEEADNALALPNVEGSVSFENVEFRYFENTDPVLSGVNFSVKPGSLVAVLGETGSGKSTLMNLIPRLIDPERGRVEVDELDVRTVKLKDLRGHISAVPQETVLFSGTIKENLKWGREDATDDEIVEAAKIAQIHDFIISLPEGYDSRVERGGRNFSGGQKQRLSIARALVKKPKVLILDDCTSSVDPITEKRILDGL-KRYTKGCTTFIITQKIPTALLADKIL--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4Q4A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -215681 for 2695 contacts (-80.0/contact) +
2D Compatibility (PS) -42703 + (NN) -25559 + (LL) 10536
1D Compatibility (HY) -33600 + (ID) 5100
Total energy: -312107.0 ( -115.81 by residue)
QMean score : 0.458
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