Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQNRQVANATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAA---TSAGSTLGEHHPHLTPLAHRVVEPTE--AAVLGGHDAVFLALPHGHSAVLAQQ-LSPETLIIDCGADFRLTDAAVWERFYGSSHAGSWP-------YGLPELPGARDQLRGTRRIAVPGCYPTAALLALFPALAADLIE----PAVTVVAVSGTSGAGRAATTDLLGAEVIGSARAYNIAGVHRHTPEIAQGLRAVTDRDVSVSFTPVLIPASRGILATCTARTRSPLSQLRAAYEKAYHA--EPFIYLMPEGQLPRTGAVIGSNAAHIAVAVDEDAQTFVAIAAIDNLVKGTAGAAVQSMNLALGWPETDGLSVVGVAP |
| 3DR3 Chain:A ((9-336)) | -------------IVGASGYAGAELVTYVNRHP-----HMNITALTVSAQSNDAGKLISDLHPQLKGIVELPLQPMSDISEFSPGVDVVFLATAHEVSHDLAPQFLEAGCVVFDLSGAFRVNDATFYEKYYGFTH--QYPELLEQAAYGLAEWCG--NKLKEANLIAVPGCYPTAAQLALKPLIDADLLDLNQWPVIN--ATSGVSGAGRKAAISNSFCEV--SLQPYGVF-THRHQPEIATHLGA------DVIFTPHLGNFPRGILETITCRLKSGVTQAQVAQALQQAYAHKPLVRLYDKG-VPALKNVVGLPFCDIGFAV--QGEHLIIVATEDNLLKGAAAQAVQCANIRFGYAETQSL------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DR3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -213463 for 2673 contacts (-79.9/contact) +
2D Compatibility (PS) -33695 + (NN) -12019 + (LL) 2824
1D Compatibility (HY) -22800 + (ID) 6400
Total energy: -285553.0 ( -106.83 by residue)
QMean score : 0.346
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