Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQPSPDSPAPLNVTVPFDSELGLQFTELGPDGARAQLDVRPKLLQLTGVVHGGVYCAMIESIASMAAFAWLNSHGEGGSVVGVNNNTDFVRSISSGMVYGTAEPLHRGRRQQLWLVTITDDTDRVVARGQVRLQNLEARP
3R35 Chain:A ((16-148))
--PDVASHYPVAYEQTLDGTVGFVIDEMTPERATASVEVTDTLRQRWGLVHGGAYCALADMLATEATVAVV--HEKGMMAVGQSNHTSFFRPVKEGHVRAEAVRIHAGSTTWFWDVSLRDDAGRLCA---VSSMSIAVRP
General information:
TITO was launched using:
RESULT:
Template:
3R35.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -80021 for 998 contacts (-80.2/contact) +
2D Compatibility (PS) -13845 + (NN) -6539 + (LL) 268
1D Compatibility (HY) -8400 + (ID) 2250
Total energy: -110787.0 ( -111.01 by residue)
QMean score : 0.458
(partial model without unconserved sides chains):
PDB file :
Tito_3R35.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3R35-query.scw
PDB file :
Tito_Scwrl_3R35.pdb
: