Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVLSRTSTGRVILVPTQLRFDRWFLPLAVPLGLGPKNSELWVGAGSLHVKMGWAFAADIPLTSITKAEATNARVYAAGVHFGFGRWLVNGSRKGLVALTIDPPEQAKMWKKSMTVRELWVSVTDPDALVTACTAK
4EL8 Chain:A ((270-354))
-------------------FDKYF----KPLGCQDKNAAGGTGYDSAHYLLSWYYAWGGAL--------WSWKIGSSHVHFGYQNPMAAWALANDSDMKPKSPNGASDWAKSL----------------------
General information:
TITO was launched using:
RESULT:
Template:
4EL8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -12719 for 466 contacts (-27.3/contact) +
2D Compatibility (PS) -8449 + (NN) -1887 + (LL) 4736
1D Compatibility (HY) -2000 + (ID) 1150
Total energy: -21469.0 ( -46.07 by residue)
QMean score : -0.011
(partial model without unconserved sides chains):
PDB file :
Tito_4EL8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4EL8-query.scw
PDB file :
Tito_Scwrl_4EL8.pdb
: