Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTRPRTDAIHHHVVVNAPIERAFAVFTTRFGDFKPREHNLLAIPITETVFECHAGGHIYDRGVDGSVCKWARVLVYEPPSRVLFTWDIGPTWRPETDLAKTSEVEVRFTAQSAETTRVDLEHRHLDRHGPGW-ESVADGVDSEAGWPLYLRRYTDLLCIQVQP
1ZXF Chain:A ((3-152))
-----DPFVRHSVTVKADRKTAFKTFLEGFPEWWPN-NFRTTKVGAPLGVD-KKGGRWYEIDEQGEEHTFGLIRKVDEPDTLVIGWRLNGFGRI--DPDNSSEFTVTFVADGQKKTRVDVEHTHFDRMGTKHAKRVRNGM--DKGWPTILQSFQDKIDEEG--
General information:
TITO was launched using:
RESULT:
Template:
1ZXF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -59472 for 1156 contacts (-51.4/contact) +
2D Compatibility (PS) -15737 + (NN) -5411 + (LL) 512
1D Compatibility (HY) -4000 + (ID) 1950
Total energy: -86058.0 ( -74.44 by residue)
QMean score : 0.275
(partial model without unconserved sides chains):
PDB file :
Tito_1ZXF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ZXF-query.scw
PDB file :
Tito_Scwrl_1ZXF.pdb
: