Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MADRVLRGSRLGAVSYETDRNHDLAPRQIARYRTD-NGEEFEVPFAD----------DAEIPGTWLCR-NGMEGTLIEGDLPEPKKVKPPRTHWDMLLERRSIEELEELLKERLELIRSRRRG
2KN9 Chain:A ((12-71))
---------------LEAQTQGPGSMNDYKLFRCIQCGFEYDEALGWPEDGIAAGTRWDDIPDDWSCPDCGAAKS------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2KN9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 258 for 216 contacts (1.2/contact) +
2D Compatibility (PS) -5124 + (NN) -4299 + (LL) 4784
1D Compatibility (HY) -1600 + (ID) 450
Total energy: -6431.0 ( -29.77 by residue)
QMean score : 0.033
(partial model without unconserved sides chains):
PDB file :
Tito_2KN9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2KN9-query.scw
PDB file :
Tito_Scwrl_2KN9.pdb
: