Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSGGSSRRYPPELRERAVRMVAEIRGQHDSEWAAISEVARLLGVGCAETVRKWVRQAQVDAGARPGTTTEESAELKRLRRDNAELRRANAILKTASAFFAAELDRPAR
2M8E Chain:A ((2-53))
-SMGKSKEISQDLRKKIVDLHKSG--------SSLGAISKRLKV-PRSSVQTIVRKYKHHGT----------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2M8E.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -16478 for 252 contacts (-65.4/contact) +
2D Compatibility (PS) -5628 + (NN) -2289 + (LL) 3908
1D Compatibility (HY) -2400 + (ID) 550
Total energy: -23437.0 ( -93.00 by residue)
QMean score : 0.706
(partial model without unconserved sides chains):
PDB file :
Tito_2M8E.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2M8E-query.scw
PDB file :
Tito_Scwrl_2M8E.pdb
: