Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MVAMLFYVDTLPDTGAVAVVDGDEGFHAATVRRIRPGEQLVLGDGVGRLARCVVEQAGRGGLRARVLR-RWSVPPVRPPVTVVQALPKSERSELAIELATEAGADAFLAWQAARCVANWDGARVDKGLRRWRAVVRSAARQSRRARIPPVDGVLSTPMLVQRVREEVAAGAAVLVLHEEATERIVDIAAAQAGSLMLVVGPEGGIAPDELAALTDAGAVAVRLGPTVLRTSTAAAVALGAVGVLTSRWDASASDCEYCDVTRR |
2CX8 Chain:A ((10-213)) | --------------GLTGVLPLRETRHLVEVLRARVGDRFTVFDG-EREALAEVVDLG-PPLRYRVLEERRPEREVGVEVVLYVALLKGDKLAEVVRAATELGATRIQPLVTRHSVPKEMG---EGKLRRLRAVALEAAKQSGRVVVPEV-----LPPIPLKAVPQVAQG---LVAHVGATARVREVLDPEK-PLALAVGPEGGFAEEEVALLEARGFTPVSLGRRILRAET------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2CX8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -78607 for 1492 contacts (-52.7/contact) +
2D Compatibility (PS) -21551 + (NN) -4315 + (LL) 4800
1D Compatibility (HY) -6400 + (ID) 3700
Total energy: -109773.0 ( -73.57 by residue)
QMean score : 0.356
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