Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSVSRRDVLKFAAATPGVLGLGVVASSLRAAPASAGSLGTLLDYAAGVI---PASQIR-AAGAVGAIRYVSDRRPGGAWMLGKPIQLSEARDLSGNGLKIVSCYQYGKGSTADWLGGASAGVQHARRGSELHAAAGGPTSAPIYASIDDNPS----------YEQYKNQIVPYLRSWESVIGHQR-TGVYANSKTIDWAVND-GL-GSYFWQHNWGSPK-GYT---HPAAHLHQVEIDKRKVGGV--GVDVNQILKPQFGQWA |
| 2WW5 Chain:A ((268-467)) | -------------------------------------AKKIIDISEHNGRINDWKKVIDENEVDGVIVRLGYSGK-----EDKELA-HNIKELNRLGIP-YGVYLYTYAE----N--ETDAENDAKQTIELIKKYNMNLSYPIYYDVENWEYVNKSKRAPSDTDTWVKIINKYMDTMKQ-A-GYQNVYVYSYRSLLQTRLKHPDILKHVNWVAAYTN-ALEWENPYYSGEKGWQYTSS-EYMKGIQGRVDVSVW--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2WW5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -53728 for 1365 contacts (-39.4/contact) +
2D Compatibility (PS) -18818 + (NN) -8795 + (LL) 3380
1D Compatibility (HY) -8800 + (ID) 1250
Total energy: -88011.0 ( -64.48 by residue)
QMean score : 0.415
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