Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTTARDIMNAGVTCVGEHETLTAAAQYMREHDIGALPICGDDDRLHGMLTDRDIVIKGLAAGLDPNTATAGELARDSIYYVDANASIQEMLNVMEEHQVRRVPVISEH-RLVGIVTEADIARHLPEHAIVQFVKAICSPMALAS
2QH1 Chain:A ((28-150))
------IMNSNFKTVNWNTTVFDAVKIMNENHLYGLVVKDDNGNDVGLLSERSIIKRFIPRNKKPDEVPIRLVMRKPIPKVKSDYDVKDVAAYLSENGLERCAVVDDPGRVVGIVTLTDLSRYLSRASI---------------
General information:
TITO was launched using:
RESULT:
Template:
2QH1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -85754 for 893 contacts (-96.0/contact) +
2D Compatibility (PS) -13355 + (NN) -6296 + (LL) 2060
1D Compatibility (HY) -10000 + (ID) 1550
Total energy: -114895.0 ( -128.66 by residue)
QMean score : 0.471
(partial model without unconserved sides chains):
PDB file :
Tito_2QH1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2QH1-query.scw
PDB file :
Tito_Scwrl_2QH1.pdb
: