Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTDSEHVGKTCQIDVLIEEHDERTRAKARLSWAGRQMVGVGLARLDPADEPVAQIGDELAIARALSDLANQLFALTSSDIEASTHQPVTGLHH
3TQM Chain:A ((36-88))
-----------NIHIIFHINKLKKIVDANVKLPGSTINAQAESD-DM----------YKTVDLLMHKLETQLSKY------------------
General information:
TITO was launched using:
RESULT:
Template:
3TQM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6766 for 316 contacts (-21.4/contact) +
2D Compatibility (PS) -5682 + (NN) -1851 + (LL) 1872
1D Compatibility (HY) -2800 + (ID) 350
Total energy: -15577.0 ( -49.29 by residue)
QMean score : 0.228
(partial model without unconserved sides chains):
PDB file :
Tito_3TQM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3TQM-query.scw
PDB file :
Tito_Scwrl_3TQM.pdb
: