Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAELTETSPETPETTEAIRAVEAFLNALQNEDFDTVDAALGDDLVYENVGFSRIRGGRRTATLLRRMQGRVGFE-VKIHRIGADGAAVLTERTDALIIGPL--RVQFWVCGVFEVDDGRITLWRDYFDVYDMFKGLLRGLVALVVPSLKATL
4R9L Chain:A ((21-136))
-------------STPDEKIVLEFMDALTSNDAAKLIEYFAEDTMYQNMPLPPAYGRDAVEQTLAGLFKVMSIDAVCVFHICSCKGLVFTERVDVLRALPTGKSYNLSILGVFQLTDGKITGWRDYFDL-----------------------
General information:
TITO was launched using:
RESULT:
Template:
4R9L.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -64423 for 810 contacts (-79.5/contact) +
2D Compatibility (PS) -12222 + (NN) -4633 + (LL) 2836
1D Compatibility (HY) -8800 + (ID) 1650
Total energy: -88892.0 ( -109.74 by residue)
QMean score : 0.509
(partial model without unconserved sides chains):
PDB file :
Tito_4R9L.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4R9L-query.scw
PDB file :
Tito_Scwrl_4R9L.pdb
: